The detailed information of tRNA gene sequence


Sequence ID>W131124638
Genome IDAPVJ01000006
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl2 [APVJ]
Start position on genome 10912
End posion on genome 10839
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gatcgggaac
tRNA gene sequence 
GCCCTCATAGCTCAGTCGGCAGAGCGCAGTCTTGGTAAGACTGAGGTCATGGGTTCAAGT
CTCATTGAGGGCTCtt
Downstream region at tRNA end position 
ttaacgaacg
Secondary structure (Cloverleaf model)
>W131124638	Thr	GGT
                   c      TCtt ttaacgaacg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T A C T C     A
      T G A        A      | | | + |     A
    C       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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