The detailed information of tRNA gene sequence


Sequence ID>W131124658
Genome IDAPVK01000009
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1-2 [APVK]
Start position on genome 706
End posion on genome 781
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaatgtttT
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGCTAGAGCGCCTGCTTTGCACGCAGGAGGTCATGGGTTCGAC
TCCCATAGAGTCCAAat
Downstream region at tRNA end position 
ttaagttctt
Secondary structure (Cloverleaf model)
>W131124658	Ala	TGC
                   T      AAat ttaagttctt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A          T C
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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