The detailed information of tRNA gene sequence


Sequence ID>W131124669
Genome IDAPVK01000029
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1-2 [APVK]
Start position on genome 13283
End posion on genome 13212
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taagtgtcct
tRNA gene sequence 
GGCGACGTGGCCAAGTGGTAAGGCGCGGGTCTGCAAAACCCTTATCACCGGTTCAAATCC
GGTCGTCGCCTCtg
Downstream region at tRNA end position 
aaataacagg
Secondary structure (Cloverleaf model)
>W131124669	Cys	GCA
                   t      TCtg aaataacagg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        G      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATC
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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