The detailed information of tRNA gene sequence


Sequence ID>W131124673
Genome IDAPVK01000040
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1-2 [APVK]
Start position on genome 8199
End posion on genome 8124
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gagagtcaat
tRNA gene sequence 
GGGGGCGTGGTGTAGCGGCTAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCGAAC
CCCGTCGCTCCCGCAA
Downstream region at tRNA end position 
taaaaaaact
Secondary structure (Cloverleaf model)
>W131124673	Asp	GTC
                   t      GCAA taaaaaaact
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      T A          G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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