The detailed information of tRNA gene sequence


Sequence ID>W131124685
Genome IDAPVK01000146
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium oral taxon 439 oral taxon 439 isolate Chl1-2 [APVK]
Start position on genome 2715
End posion on genome 2790
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gattgagtac
tRNA gene sequence 
GGGCCTGTAGCGCAGTTGGGAGCGCGCTTCAATCGCACTGAAGAGGCCGTGAGTTCGAAT
CTCACCAGGTCCACAA
Downstream region at tRNA end position 
ttattctcct
Secondary structure (Cloverleaf model)
>W131124685	Ala	CGC
                   c      ACAA ttattctcct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
      T G A        A      | | | | |     G
    T       C G C G       G T G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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