The detailed information of tRNA gene sequence


Sequence ID>W1711074406
Genome IDLSJM01000367
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. CCH9-E2 [LSJM]
Start position on genome 7584
End posion on genome 7509
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cacccgccgc
tRNA gene sequence 
GCCGGTTTAGCTCAGCTGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCGATT
CCTGCAACCGGCACCA
Downstream region at tRNA end position 
ccccctattc
Secondary structure (Cloverleaf model)
>W1711074406	Thr	TGT
                   c      ACCA ccccctattc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A          T T
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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