The detailed information of tRNA gene sequence


Sequence ID>W1711075704
Genome IDLSKQ01000173
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesErythrobacter sp. CCH5-A1 [LSKQ]
Start position on genome 3267
End posion on genome 3192
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagcgagtgc
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGCCACGGGTTCGAAT
CCTGTCACCCCTGCCA
Downstream region at tRNA end position 
ttctttgtgt
Secondary structure (Cloverleaf model)
>W1711075704	Trp	CCA
                   c      GCCA ttctttgtgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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