The detailed information of tRNA gene sequence


Sequence ID>W1711081730
Genome IDLSSX01000135
Search identical group
Phylum/ClassUnclassified
Speciesbacterium SCGC AG-212-C10 [LSSX]
Start position on genome 42685
End posion on genome 42761
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcgtcacct
tRNA gene sequence 
GGCGCGTTCGTCTAGTGGCCCAGGACGCCGCCCTTTCAAGGCGGAGATCAGGGGTTCGAC
TCCCCTACGCGCTACCA
Downstream region at tRNA end position 
ctcctcttca
Secondary structure (Cloverleaf model)
>W1711081730	Glu	TTC
                   t      ACCA ctcctcttca
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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