The detailed information of tRNA gene sequence


Sequence ID>W1711081767
Genome IDLSTA01000004
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium SCGC AG-212-E04 [LSTA]
Start position on genome 25752
End posion on genome 25827
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcccagaaa
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGTAGAGTTGCGGTCTCCAAAACCGTCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
cgacccgccg
Secondary structure (Cloverleaf model)
>W1711081767	Trp	CCA
                   a      GCCA cgacccgccg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          T     CGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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