The detailed information of tRNA gene sequence


Sequence ID>W1711081819
Genome IDLSTC01000090
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospira sp. SCGC AG-212-E16 [LSTC]
Start position on genome 18373
End posion on genome 18449
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
caagtaattt
tRNA gene sequence 
GCGCCCGTAGCTCAGTCGGATAGAGCATCAGCCTTCTAAGCTGAGGGTCGCTGGTTCGAT
TCCAGCCGGGCGCACCA
Downstream region at tRNA end position 
taaatcaata
Secondary structure (Cloverleaf model)
>W1711081819	Arg	TCT
                   t      ACCA taaatcaata
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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