The detailed information of tRNA gene sequence


Sequence ID>W1711081830
Genome IDLSTD01000027
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetaceae bacterium SCGC AG-212-F19 [LSTD]
Start position on genome 4018
End posion on genome 3945
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccgaccgc
tRNA gene sequence 
GGCGGGGTAGCTCAGTGGTTAGAGCAGCGGCTTCATAAGCCGCGTGTCGCGGGTTCGACC
CCCGCCCCCGCTACtc
Downstream region at tRNA end position 
tcctcacccg
Secondary structure (Cloverleaf model)
>W1711081830	Met	CAT
                   c      ACtc tcctcacccg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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