The detailed information of tRNA gene sequence


Sequence ID>W1711081871
Genome IDLSTD01000286
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetaceae bacterium SCGC AG-212-F19 [LSTD]
Start position on genome 8570
End posion on genome 8497
Amino Acid Pseudo
Anticodon GCG
Upstream region at tRNA start position 
cgagacgatt
tRNA gene sequence 
GTCCTCGGGGTGTGGCGGACGCGCACGCAACCCTGCGAAGGTTGAAGGCCAGGTTCGACT
CCTGGCGGGGACACtt
Downstream region at tRNA end position 
ttgctaacgc
Secondary structure (Cloverleaf model)
>W1711081871	Pseudo	GCG
                   t      ACtt ttgctaacgc
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T C
                    G     G G T C C     A
      C G G        G      | | | | |     G
    G       T G T G       C C A G G     C
    G       + | | |                 T T
    A       G C A C
      C G C        G     AAGG
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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