The detailed information of tRNA gene sequence


Sequence ID>W1711081936
Genome IDLSTG01000038
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesOpitutae bacterium SCGC AG-212-L18 [LSTG]
Start position on genome 1463
End posion on genome 1374
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctttcacca
tRNA gene sequence 
GGAGAGGTGACAGAGCGGCCGATTGTGCAGCATTGGAAATGCTGTGTACTGGCAACGGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ctcctctctt
Secondary structure (Cloverleaf model)
>W1711081936	Ser	GGA
                   a      GCCA ctcctctctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C A       G C G G G     C
    G       + | | |                 T T
    C       T T G T
      C G A        G     TGTACTGGCAACGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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