The detailed information of tRNA gene sequence


Sequence ID>W1711081979
Genome IDLSTK01000011
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium SCGC AG-212-P17 [LSTK]
Start position on genome 1488
End posion on genome 1413
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaacgcggg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCAGCAGACTCATAATCTGTTGGTTGTAGGTTCGAAT
CCTACCGGGCCCACCA
Downstream region at tRNA end position 
aattcagcaa
Secondary structure (Cloverleaf model)
>W1711081979	Met	CAT
                   g      ACCA aattcagcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C A T C C     A
      C A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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