The detailed information of tRNA gene sequence


Sequence ID>W1711090927
Genome IDLTBA01000038
Search identical group
Phylum/ClassBacillota
SpeciesClostridium tepidiprofundi DSM 19306 [LTBA]
Start position on genome 345
End posion on genome 270
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atctgtgctt
tRNA gene sequence 
AGGGGTATGGCTCAATTGGTAGAGTAGTGGTCTCCAAAACCATTGGTTCCGGGTTCGAGT
CCTGGTGCCCCTGCCA
Downstream region at tRNA end position 
gtttatgaat
Secondary structure (Cloverleaf model)
>W1711090927	Trp	CCA
                   t      GCCA gtttatgaat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T A A        G      | | + | |     G
    T       C T C G       C C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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