The detailed information of tRNA gene sequence


Sequence ID>W1711090935
Genome IDLTBA01000050
Search identical group
Phylum/ClassBacillota
SpeciesClostridium tepidiprofundi DSM 19306 [LTBA]
Start position on genome 8294
End posion on genome 8205
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattattttt
tRNA gene sequence 
GGAGAGATGTCTGAGCGGCTTAAGGAGCACGCCTGGAACGCGTGTGTAGGGGAAACTCTA
CCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttccgtact
Secondary structure (Cloverleaf model)
>W1711090935	Ser	GGA
                   t      GCCA gttccgtact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T T A        G     TGTAGGGGAAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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