The detailed information of tRNA gene sequence


Sequence ID>W1711091316
Genome IDLTBM01000001
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Phytoplasma oryzae [LTBM]
Start position on genome 119786
End posion on genome 119696
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taattaaaaa
tRNA gene sequence 
GGAGTAGTACTCAAGTGGTTAAAGAGGCGTCCCTGCTAAGGACGTAGTCCAAAAATTTGG
TGCAAGGGTTCGAATCCCTTCTACTCCGCCA
Downstream region at tRNA end position 
aattaaaaaa
Secondary structure (Cloverleaf model)
>W1711091316	Ser	GCT
                   a      GCCA aattaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       A A G G G     C
    G         | | |                 T T
    T       A G A G
      T A A        G     TAGTCCAAAAATTTGGTGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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