The detailed information of tRNA gene sequence


Sequence ID>W1711092442
Genome IDLTEC01000014
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAphanizomenon flos-aquae UKL13-PB [LTEC]
Start position on genome 48668
End posion on genome 48740
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaggatttc
tRNA gene sequence 
GGGGTTATAGCGCAGTTGGTAGCGCACCTCAATGGCATTGAGGGGGTCAGCGGTTCGAAT
CCGCTTAGCTCCAtgg
Downstream region at tRNA end position 
aatgagatga
Secondary structure (Cloverleaf model)
>W1711092442	Ala	GGC
                   c      Atgg aatgagatga
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C G C G       A G C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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