The detailed information of tRNA gene sequence


Sequence ID>W131157391
Genome IDAQSB01000011
Search identical group
Phylum/ClassUnclassified
SpeciesMarinimicrobia bacterium SCGC AAA160-C11 [AQSB]
Start position on genome 64798
End posion on genome 64884
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaaaatatt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTAAGGTTAATAGCTTT
CGCAGGTTCGAATCCTGTCCTCTCCGCac
Downstream region at tRNA end position 
tttttataaa
Secondary structure (Cloverleaf model)
>W131157391	Ser	GGA
                   t      GCac tttttataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TAAGGTTAATAGCTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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