The detailed information of tRNA gene sequence


Sequence ID>W131157899
Genome IDAQTE01000133
Search identical group
Phylum/ClassUnclassified
SpeciesCalescamantes bacterium JGI 0000106-G12 EM 19 bacterium JGI 0000106-G12 [AQTE]
Start position on genome 55532
End posion on genome 55608
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atttcagaga
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGTTAGAACGCCGGTCTGTCAAGCCGGAGGTCGCGGGTTCAAG
TCCCGTCAGCCCCGCCA
Downstream region at tRNA end position 
cctttaaatt
Secondary structure (Cloverleaf model)
>W131157899	Asp	GTC
                   a      GCCA cctttaaatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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