The detailed information of tRNA gene sequence


Sequence ID>W131158342
Genome IDAQTY01000008
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 34211
End posion on genome 34138
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacatttca
tRNA gene sequence 
GGCACCGTCGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATCGGCGGTTCGAGTCC
GCCCGGTGCCTCCA
Downstream region at tRNA end position 
ttttcttcaa
Secondary structure (Cloverleaf model)
>W131158342	Cys	GCA
                   a      TCCA ttttcttcaa
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     C C G C C     A
        G A        C      | | | | |     G
      T     A C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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