The detailed information of tRNA gene sequence


Sequence ID>W131158344
Genome IDAQTY01000009
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 42306
End posion on genome 42215
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taacagacct
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGCTTAACCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tctaatttag
Secondary structure (Cloverleaf model)
>W131158344	Ser	GCT
                   t      GCCA tctaatttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGCTTAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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