The detailed information of tRNA gene sequence


Sequence ID>W131158346
Genome IDAQTY01000009
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 40043
End posion on genome 39956
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgcaatata
tRNA gene sequence 
GGAGAGGTGGTCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGTTTAACCCCT
ACCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
gaacttaatt
Secondary structure (Cloverleaf model)
>W131158346	Ser	GGA
                   a      Gttt gaacttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C T G       G A G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        G     TGTAGGTTTAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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