The detailed information of tRNA gene sequence


Sequence ID>W131158353
Genome IDAQTY01000041
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. SCGC AAA288-L16 SCGC AAA288-L16 [AQTY]
Start position on genome 3651
End posion on genome 3727
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
taagatatat
tRNA gene sequence 
ACGCCTGTAGCTCAGTTGGATAGAGCGTTGGTTTCCGGAACCAAAAGTCGGAGGTTCGAG
TCCTCTCAGGCGTGCCA
Downstream region at tRNA end position 
tattttttac
Secondary structure (Cloverleaf model)
>W131158353	Arg	CCG
                   t      GCCA tattttttac
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AAGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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