The detailed information of tRNA gene sequence


Sequence ID>W131158374
Genome IDAQTZ01000082
Search identical group
Phylum/ClassChloroflexota
SpeciesSAR202 cluster bacterium SCGC AAA240-N13 [AQTZ]
Start position on genome 81
End posion on genome 5
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctgcatgtgt
tRNA gene sequence 
GGGGCGTTCGTCTAGCGGCCCAGGACACCGCCCTCTCAAGGCGGAGATCAGGGGTTCAAA
TCCCCTACGCCCTACCA
Downstream region at tRNA end position 
aaatnnnnnn
Secondary structure (Cloverleaf model)
>W131158374	Glu	CTC
                   t      ACCA aaatnnnnnn
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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