The detailed information of tRNA gene sequence


Sequence ID>W131159548
Genome IDAQVE01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThiolinea disciformis DSM 14473 [AQVE]
Start position on genome 223917
End posion on genome 223821
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gttgaagcgt
tRNA gene sequence 
GGAAGGGTGGCGCACTCCGGTGGGGCGTCCAGACTTCAAATTTGGGAGAGGCTGTCACAC
GGCTTCTGGTGGGTTCGACTCCCATACCCTTCCGCCA
Downstream region at tRNA end position 
tttttagtga
Secondary structure (Cloverleaf model)
>W131159548	SeC	TCA
                   t      GCCA tttttagtga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C T C        G      + | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        T     GAGAGGCTGTCACACGGCTTCTG
                    C - G
                    C - G
                    A - T
                    G + T
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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