The detailed information of tRNA gene sequence


Sequence ID>W1711109217
Genome IDLTUL01000057
Search identical group
Phylum/ClassActinomycetota
SpeciesRothia sp. HMSC076D04 [LTUL]
Start position on genome 87024
End posion on genome 86950
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaatgatgt
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGTTAGAGCGCACGACTCATAATCGTGAGGTCGACGGATCGAG
CCCGTCCACCGCTACgc
Downstream region at tRNA end position 
cccgatagct
Secondary structure (Cloverleaf model)
>W1711109217	Met	CAT
                   t      ACgc cccgatagct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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