The detailed information of tRNA gene sequence


Sequence ID>W131159820
Genome IDAQVV01000012
Search identical group
Phylum/ClassNitrospinota
SpeciesCandidatus Nitromaritima sp. AB-629-B18 AB-629-B18 [AQVV]
Start position on genome 2465
End posion on genome 2540
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaatgcgaaT
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCGTCGGACTCCAAATCCGGTGGTTGGGGGTTCGAG
TCCCTCCTGGCCTGTat
Downstream region at tRNA end position 
tgaatttttg
Secondary structure (Cloverleaf model)
>W131159820	Trp	CCA
                   T      GTat tgaatttttg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     TGGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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