The detailed information of tRNA gene sequence


Sequence ID>W1711112911
Genome IDLTXV01000035
Search identical group
Phylum/ClassActinomycetota
SpeciesRothia sp. HMSC068F09 [LTXV]
Start position on genome 116478
End posion on genome 116405
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caggcttcaa
tRNA gene sequence 
AGGGTGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCtt
Downstream region at tRNA end position 
aaattgcctc
Secondary structure (Cloverleaf model)
>W1711112911	Trp	CCA
                   a      GCtt aaattgcctc
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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