The detailed information of tRNA gene sequence


Sequence ID>W131161000
Genome IDAQXE01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio oxyclinae DSM 11498 [AQXE]
Start position on genome 1222
End posion on genome 1131
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctttgcagc
tRNA gene sequence 
GGCGGGGTGTCCGAGTCCGGCTTATGGAGGCGGTCTTGAAAACCGTTGGCCTTTCACGAG
GCCCGTGGGTTCGAATCCTACCCCCGCCGCCA
Downstream region at tRNA end position 
attgacagaa
Secondary structure (Cloverleaf model)
>W131161000	Ser	TGA
                   c      GCCA attgacagaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
    C T G A        G      | | + | |     G
  C         G C C T       G T G G G     C
  G         + | | |                 T T
  G         T G G A
    C T T A        G     TGGCCTTTCACGAGGCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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