The detailed information of tRNA gene sequence


Sequence ID>W131161004
Genome IDAQXE01000005
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfovibrio oxyclinae DSM 11498 [AQXE]
Start position on genome 78333
End posion on genome 78258
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttgcggagt
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGCAGAGCCACCGGCTCATAACCGGTCGGTCCCAGGTTCAAAT
CCTGGTTGGCCCACCA
Downstream region at tRNA end position 
cccctaaccc
Secondary structure (Cloverleaf model)
>W131161004	Met	CAT
                   t      ACCA cccctaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G + T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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