The detailed information of tRNA gene sequence


Sequence ID>W131161528
Genome IDAQXT01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHenriciella marina DSM 19595 [AQXT]
Start position on genome 2338272
End posion on genome 2338183
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcccttac
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCTAGCAATAGTC
TCCAGGGTTCGAATCCCTGTCTCACCGCCA
Downstream region at tRNA end position 
ttcccacgat
Secondary structure (Cloverleaf model)
>W131161528	Ser	GGA
                   c      GCCA ttcccacgat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCTAGCAATAGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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