The detailed information of tRNA gene sequence


Sequence ID>W1711125163
Genome IDLUMY01000109
Search identical group
Phylum/ClassActinomycetota
SpeciesAcidimicrobiia bacterium REDSEA-S14_B4 [LUMY]
Start position on genome 5295
End posion on genome 5206
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgccggt
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCATGGGTTCGAATCCCATACCTTCCGCCA
Downstream region at tRNA end position 
tcccgacggc
Secondary structure (Cloverleaf model)
>W1711125163	Ser	CGA
                   t      GCCA tcccgacggc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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