The detailed information of tRNA gene sequence


Sequence ID>W1711125200
Genome IDLUMZ01000182
Search identical group
Phylum/ClassActinomycetota
SpeciesAcidimicrobiia bacterium REDSEA-S20_B6 [LUMZ]
Start position on genome 4145
End posion on genome 4238
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtccgttcga
tRNA gene sequence 
GGAGAGGTGGCCGAGTCAGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCCCAAAAG
CTCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttccgaccg
Secondary structure (Cloverleaf model)
>W1711125200	Ser	GCT
                   a      GCCA tttccgaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  A         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C G A        G     TATGGGCCCAAAAGCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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