The detailed information of tRNA gene sequence


Sequence ID>W131164423
Genome IDARAS01000128
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobium sp. 3C [ARAS]
Start position on genome 2262
End posion on genome 2172
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcgtctccc
tRNA gene sequence 
GGAGCTGTGCCTGAGCGGCTGAAAGGGACGGTTTGCTAAACCGTTGTACCCCAAAAGGGT
ACCGAGGGTTCGAATCCCTCCGGCTCCGCCA
Downstream region at tRNA end position 
tttcggaacg
Secondary structure (Cloverleaf model)
>W131164423	Ser	GCT
                   c      GCCA tttcggaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      T G A        G     TGTACCCCAAAAGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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