The detailed information of tRNA gene sequence


Sequence ID>W1711136221
Genome IDLUZZ01000043
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophobacterales bacterium Delta_01 [LUZZ]
Start position on genome 2489
End posion on genome 2391
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggactgattc
tRNA gene sequence 
GGAAGCGCCAAGCTCACTGGTGGGGCTCCCGGGCTTCAAACCCGGTGTGGGGCGCTGAAG
GGCGTCCCAGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
actctcaatc
Secondary structure (Cloverleaf model)
>W1711136221	SeC	TCA
                   c      GCCA actctcaatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T C G A       G T G G G     C
    G       + | | |                 T T
    G       G G C T
      T G G        C     TGTGGGGCGCTGAAGGGCGTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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