The detailed information of tRNA gene sequence


Sequence ID>W1711137597
Genome IDLVBP01000233
Search identical group
Phylum/ClassSynergistota
SpeciesSynergistales bacterium Syner_02 [LVBP]
Start position on genome 1761
End posion on genome 1676
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcgttccgc
tRNA gene sequence 
GGAGGGCTGTCCGAGTGGTCTATGGTGGCTGACTTGAAATCAGCTGGGCGAAAGCCCCGG
GGGTTCGAATCCCTCGCCCTCCGCCA
Downstream region at tRNA end position 
cacgaactca
Secondary structure (Cloverleaf model)
>W1711137597	Ser	TGA
                   c      GCCA cacgaactca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGGGCGAAAGCCCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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