The detailed information of tRNA gene sequence


Sequence ID>W1711138287
Genome IDLVCQ01000112
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPiscirickettsiaceae bacterium NZ-RLO1 NZ-RLO [LVCQ]
Start position on genome 3207
End posion on genome 3297
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgtctttac
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAGGGTTAATAGCCC
TTCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
gactttagct
Secondary structure (Cloverleaf model)
>W1711138287	Ser	TGA
                   c      GCCA gactttagct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTAATAGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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