The detailed information of tRNA gene sequence


Sequence ID>W131167677
Genome IDARDL01000013
Search identical group
Phylum/ClassDeinococcota
SpeciesCalidithermus timidus DSM 17022 [ARDL]
Start position on genome 94357
End posion on genome 94448
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accttcacct
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCACAGGTTTGCTAAACCTGCATAGGGGGTAACCTC
TATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
agcaagagcc
Secondary structure (Cloverleaf model)
>W131167677	Ser	GCT
                   t      GCCA agcaagagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATAGGGGGTAACCTCTATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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