The detailed information of tRNA gene sequence


Sequence ID>W131167746
Genome IDARDN01000001
Search identical group
Phylum/ClassBacteroidota
SpeciesEchinicola pacifica DSM 19836 [ARDN]
Start position on genome 366545
End posion on genome 366620
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagatatat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCGAGT
CCAGTTCCCGCTACTA
Downstream region at tRNA end position 
caaacccctt
Secondary structure (Cloverleaf model)
>W131167746	Met	CAT
                   t      ACTA caaacccctt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C G A G       A C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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