The detailed information of tRNA gene sequence


Sequence ID>W1711139231
Genome IDLVET01000033
Search identical group
Phylum/ClassFusobacteriota
SpeciesFusobacterium necrophorum subsp. funduliforme [LVET]
Start position on genome 154881
End posion on genome 154798
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
tcggttgtat
tRNA gene sequence 
GGAGAGTTATCCTAACTGGTAAGGAAGTAGTCTACTAAACTACCGCCGCAAGGCTTATAG
GTTCGAATCCTATACTCTCCGCCA
Downstream region at tRNA end position 
atattaacgt
Secondary structure (Cloverleaf model)
>W1711139231	Ser	ACT
                   t      GCCA atattaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A T C C     A
      C A A        A      | | | | |     G
    T       T C C T       A T A G G     C
    G       | | | |                 T T
    G       A G G A
      T A          A     CGCCGCAAGGCTT
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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