The detailed information of tRNA gene sequence


Sequence ID>W131168526
Genome IDAREC01000011
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 58772
End posion on genome 58859
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgttatcgca
tRNA gene sequence 
GGAGAGTTGCGAGAGTGGTTGAATCGGGCGGACTCGAAATCCGTTGTACAGTTCTGCTGT
ACCGAGGGTTCGAATCCCTCACTCTCCGgta
Downstream region at tRNA end position 
gcggttctgc
Secondary structure (Cloverleaf model)
>W131168526	Ser	CGA
                   a      Ggta gcggttctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTACAGTTCTGCTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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