The detailed information of tRNA gene sequence


Sequence ID>W131168530
Genome IDAREC01000013
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 102166
End posion on genome 102089
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ccctgttgat
tRNA gene sequence 
GCGCCCGTAGCTCAGCCTGGATAGAGCGTCGGACTTCGAATCCGCAGGTCGCAGGTTCGA
ATCCTGCCGGGCGTACAA
Downstream region at tRNA end position 
cacattttgg
Secondary structure (Cloverleaf model)
>W131168530	Arg	TCG
                   t      ACAA cacattttgg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C A G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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