The detailed information of tRNA gene sequence


Sequence ID>W131168538
Genome IDAREC01000018
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 33228
End posion on genome 33300
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtaacagag
tRNA gene sequence 
GGTGGCGTAGCTCAGTCGGTAGAGCAAGCGGCTCATATCCGCTCGGTCAGGGGTTCAAGT
CCCTTCGCCACTAtct
Downstream region at tRNA end position 
ttcaaggcac
Secondary structure (Cloverleaf model)
>W131168538	Met	CAT
                   g      Atct ttcaaggcac
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     A
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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