The detailed information of tRNA gene sequence


Sequence ID>W131168543
Genome IDAREC01000019
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 53952
End posion on genome 54026
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttctaccc
tRNA gene sequence 
GGCCCGTTCGTCTAGCGGCTAGGACGCGGGATTCTCATTCCCGAAACAGGGGTTCGATTC
CCCTACGGGCTATCA
Downstream region at tRNA end position 
ggccggtgag
Secondary structure (Cloverleaf model)
>W131168543	Glu	CTC
                   c      ATCA ggccggtgag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          G     AAAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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