The detailed information of tRNA gene sequence


Sequence ID>W131168546
Genome IDAREC01000023
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 107
End posion on genome 180
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgncccaagc
tRNA gene sequence 
GCCCCGGTAGCTCAGCAGGATAGAGCAACGGCCTCCTAAGCCGTAGGTCACCCGTTCGAA
TCGGGTCCGGGGTAacc
Downstream region at tRNA end position 
cttctggcac
Secondary structure (Cloverleaf model)
>W131168546	Arg	CCT
                   c      Aacc cttctggcac
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G G G C     A
      C G A        A      | | | | |     G
    A       C T C G       A C C C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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