The detailed information of tRNA gene sequence


Sequence ID>W131168550
Genome IDAREC01000030
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 47659
End posion on genome 47586
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccggcgttac
tRNA gene sequence 
GGGCGAATAGCTCAGCTGGGAGAGCGCCTGCCTTACAAGCAGGATGTCGGGGGTTCAAAT
CCCTCTTCGCCCACgt
Downstream region at tRNA end position 
ttaaaccctt
Secondary structure (Cloverleaf model)
>W131168550	Val	TAC
                   c      ACgt ttaaaccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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