The detailed information of tRNA gene sequence


Sequence ID>W131168557
Genome IDAREC01000041
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta alkalica DSM 8900 [AREC]
Start position on genome 16520
End posion on genome 16447
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tccacactat
tRNA gene sequence 
CGGGCTGTAGCGCAGGGGCTAGCGCGCGCCGTTCGGGACGGTGAGGTCGGAGGTTCAAAT
CCTCTCAGCCCGACtt
Downstream region at tRNA end position 
caatccccct
Secondary structure (Cloverleaf model)
>W131168557	Pro	CGG
                   t      ACtt caatccccct
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      G G A        A      + | | | |     A
    G       C G C G       G G A G G     C
    G       | | | |                 T T
    C       G C G C
      T A          G     AGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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