The detailed information of tRNA gene sequence


Sequence ID>W1711143786
Genome IDLVHQ01000026
Search identical group
Phylum/ClassCyanobacteriota
SpeciesProchlorococcus marinus str. MIT 1323 [LVHQ]
Start position on genome 236003
End posion on genome 235931
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
ccgtgattga
tRNA gene sequence 
GGGGGTCTAGCAATCTGGTGAATGCAGCGAACTCATAATTCGCCTAAGGCGAGTTCGATC
CTCGCGACCCCCAtat
Downstream region at tRNA end position 
tttcttcatt
Secondary structure (Cloverleaf model)
>W1711143786	Pseudo	CAT
                   a      Atat tttcttcatt
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          C T
                    T     C G C T C     A
      T C T        A      | | | | |     G
    G       A A C G       G C G A G     C
    G         | | |                 T T
    T       A T G C
      G A          A     CTAAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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