The detailed information of tRNA gene sequence


Sequence ID>W1711143973
Genome IDLVHV01000002
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. MIT S9509 [LVHV]
Start position on genome 78977
End posion on genome 78889
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgcagctT
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGTAGGTGCAAGCCTA
CCGTCGGTTCGAATCCGACCCTCTCCGTtt
Downstream region at tRNA end position 
caaaaaccca
Secondary structure (Cloverleaf model)
>W1711143973	Ser	TGA
                   T      GTtt caaaaaccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T C G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGTAGGTGCAAGCCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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